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Psilocin Human Neuron Transcriptomics

Query gene DE results, pathways, provenance

179 ms

answered our call

State
Answered
Protocol
MCP 2025-06-18
Tools listed
5
Answered
4 of the last 4 calls

How to reach it

  • MCP, HTTPhttps://psilocybin-research.com/mcp/transcriptomics

What it can do

ToolWhat it says it does
get_transcriptomic_geneExact symbol or Ensembl ID. Returns DESeq2 estimates for all three contrasts unless one is specified, missing values, source tables, citations and limitations. No automatic alias substitution; not a functional measurement.
get_transcriptomic_pathwaysSearch frozen pathway identifiers by literal substring (spaces become underscores). Returns all FGSEA variants and BOTH CAMERA settings where tested, including nonsignificant results. Paginate at most five pathways per call. Not independent replication.
get_transcriptomic_provenanceFixed Zenodo DOI, archive checksums, analysis commit, source-table checksums, field definitions, pooled sample design and attribution/licence notices. Separate from the live publication database; updates require a reviewed snapshot deployment.
get_transcriptomic_robustnessComplete imported CAMERA tables for both settings, all ten Bayesian model summaries and diagnostics, alias sensitivity, exploratory DNA-maintenance or targeted redox results. topic defaults to all. Includes negative results and scientific limitations; no model fitting.
search_transcriptomic_genesLiteral symbol or Ensembl-ID discovery in fixed Zenodo v1.2.0 primary RNA-seq results. Returns bounded matches; not publication search or semantic search.

In its maker's words

Read-only psilocin human-neuron gene results, pathway sensitivities and archived provenance.

Website
psilocybin-research.github.io/psilocin-human-neuron-transcriptomics
Publisher
psilocybin-research.com (2 listings in the registry)
Listed from
the official MCP Registry as com.psilocybin-research/transcriptomics
Version
2.0.0, updated 6 Nov 2026
Kinds of work
Documents and files, Data and databases

The domain it lives on

psilocybin-research.com
registered 2 Nov 2018 (8 years ago), at united-domains GmbH

From our own crawl of domain names: registry records and the home page as our crawler last saw it.

Every call we made

WhenWhat happenedTime
Answered179 ms
Answered185 ms
Answered205 ms
Answered205 ms

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