bots.st/oliver-s-mtor-atlas
Oliver's mTOR Atlas
mTOR pathway claims with evidence
2196 ms
answered our call
- State
- Answered
- Protocol
- MCP 2025-06-18
- Tools listed
- 13
- Answered
- 3 of the last 3 calls
How to reach it
- MCP, HTTP
https://mtor-atlas-mcp.mtor-atlas.workers.dev/mcp - npm
npx -y mtor-atlas-mcpReleased 17 Oct 2026, version 1.3.3
What it can do
| Tool | What it says it does |
|---|---|
atlas_about | Dataset version, corpus snapshot date, counts, evidence-code legend and how to cite the dataset. When the Atlas does not report the contested and conflicting counts itself, derived_counts adds them, computed from the relations, so they can be compared with find_contradictions. |
evidence_between | Direct curated relations between two entities (either direction) with full cards for the supporting and conflicting studies. Answers questions such as "what is the evidence that A acts on B?". A study that repeats within the answer is sent in full once and afterwards as a short card with… |
find_contradictions | Relations the Atlas marks as contested or that carry conflicting studies, with both sides of the evidence. status says which; breakdown splits the total. conflict carries WHY the studies disagree (Opposing result / Different context / Field dispute) with its basis. A contested relation with no… |
find_relations | Signed, evidence-linked pathway relations (claims such as "Rheb activates mTORC1"). Filter by an entity on either end, by source/target, effect, contested status or minimum strength of the best supporting evidence. |
get_author | One profiled author by profile id ("claudio-de-virgilio"), full name, author-list form or ORCID: lab, role, profile URL and short cards of their studies in the Atlas. If the name fits several people or has no profile page, the answer lists candidates (resolved: false) instead. |
get_entity | One entity (gene/protein, complex, drug, disease, process...) with its linked studies as short cards (first studies_limit) and every pathway relation it takes part in as a one-line claim. Accepts an id, a name or a synonym. |
get_question | One open or frontier question by ID (e.g. "H1", "F2"): the gap, what changed, what is still open, how it could be tested, linked studies. |
get_relation | One pathway relation by ID (e.g. "RHEB-MTORC1"): mechanism, boundary conditions, confidence, supporting and conflicting studies. |
get_study | Full record for one study by Atlas ID (e.g. "SAB1994"), PMID, DOI or PMCID: abstract excerpt, extracted findings, linked entities, the relations it supports or contradicts, related open questions. |
list_questions | The Atlas's open questions (evidence gaps with testable hypotheses) and frontier questions. Paged. By default still_open is shortened at a sentence boundary (still_open_truncated); get_question has the full text, or pass brief=false. |
search_authors | People in the Atlas by full name ("Claudio De Virgilio"), author-list form ("De Virgilio C"), ORCID or lab. results are authors with a profile page (full name, ORCID, lab, their study IDs); in_author_lists are matching names in study author lists without a profile. |
search_entities | Find genes/proteins, complexes, drugs, diseases, processes, nutrients and outcomes by name or synonym. Each result says where it matched (match_field: name, synonym or description); use match="name" to leave out description-only hits. |
search_studies | Search the curated studies by keywords, optionally filtered by evidence code, a linked entity (gene, drug, disease...) and year range. Searches title, finding, authors (author-list form "Sabatini DM" and full names of profiled authors), PMID, DOI, PMCID, linked entities and their synonyms… |
In its maker's words
Evidence-labelled mTOR research: studies, entities, pathway claims, contradictions, open questions.
- Website
- mtor-atlas.org/api
- Source
- github.com/open-mtor-atlas/atlas
- Publisher
- open-mtor-atlas
- Listed from
- the official MCP Registry as
io.github.open-mtor-atlas/mtor-atlas - Version
- 1.3.3, updated 17 Oct 2026
- Kinds of work
- Search and research, Data and databases, AI models and agent tools
The domain it lives on
- mtor-atlas.org
- registered 13 Jul 2026 (4 months ago), at TUCOWS.COM, CO., its home page is a working site
From our own crawl of domain names: registry records and the home page as our crawler last saw it.
Every call we made
| When | What happened | Time |
|---|---|---|
| Answered | 2196 ms | |
| Answered | 2146 ms | |
| Answered | 662 ms |
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